NOTE: this information is intended only for the students of
MDINF 6600 at the University of Utah in the Spring Semester 2002.
Office: INSCC 418 or BPRP 295 (call first)
The most reliable means of reaching me is by e-mail.
Links to WWW pages and articles of possible interest
Please e-mail me if you have any questions!!!
- CASP Special Issues & Links:
- See Biotechniques 32:3, 572-591 (2002) for a review of
multiple sequence alignment.
Sali's WWW pages and links to the
Modeller program. Here is a link to a review article
describing comparative modeling in Ann. Rev. Biophys. Biomol. Struct.
29, 291-325 (2000). Here is the original reference,
a link to a PDF in JMB 234, 779-815 (1993).
Rost & Sander "Prediction of Protein Secondary Structure at better than
70% accuracy", a PDF in J. Mol. Biol. 232, 584-599 (1993).
Jones "Protein secondary structure prediction based on position-specific
scoring matrices", a PDF in JMB 292, 195-202 (1999).
Karplus et al. "Predicting protein structure using only sequence information"
in Proteins Suppl. 3, 121-125 (1999).
- Article: A classic on the
placement of side chains based on a development of library of
preferred rotamers, a PDF in JMB 230, 543-574 (1993).
Last modified: March 2002